STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swc5SWR1-complex protein 5. (341 aa)    
Predicted Functional Partners:
rvb1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 
 0.958
swc4
SWR1-complex protein 4.
   
 
 0.952
swr1
Helicase swr1.
    
 
 0.941
htz1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.937
rvb2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.907
CLCR_01106
Signal transducer.
   
 
 0.854
yaf9
Protein AF-9 like protein.
   
 
 0.794
CLCR_03847
Transcription regulator BDF1.
    
 
 0.756
CLCR_00102
Uncharacterized protein.
    
 
 0.704
CLCR_04823
Abhydrolase_3 domain-containing protein.
    
 
 0.704
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.