STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCS7Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. (395 aa)    
Predicted Functional Partners:
NIAD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.930
SUR2
Sphingolipid C4-hydroxylase SUR2; Belongs to the sterol desaturase family.
   
 
 0.928
CLCR_07384
Sterol desaturase family; Belongs to the sterol desaturase family.
   
 
 0.924
CLCR_09215
Putative C-4 methyl sterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.924
CLCR_09260
Putative C-4 methyl sterol oxidase.
   
 
 0.924
rsd1
RNA-binding protein rsd1.
 
      0.897
ERG3
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 
 0.835
OLE1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.810
CLCR_02057
Heme/steroid binding protein; Belongs to the cytochrome b5 family.
   
 0.778
CLCR_03265
Putative nuclear import and export protein Msn5.
    
   0.701
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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