STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_06780Putative Woronin body protein HexA. (538 aa)    
Predicted Functional Partners:
RPS18
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.992
rps23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.992
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.991
CLCR_04232
60S ribosomal protein L5.
   
 
 0.990
RPL35
60S ribosomal protein L35.
   
 
 0.990
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.990
rpl25b
60S ribosomal protein L25-B.
   
 
 0.987
rps6b
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.987
rpl21b
60S ribosomal protein L21-B.
  
   0.986
CLCR_09280
Uncharacterized protein.
  
 
 0.985
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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