STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_06575Uncharacterized protein. (1222 aa)    
Predicted Functional Partners:
CLCR_05489
Putative MHYT domain signaling protein.
    
 0.764
CLCR_07241
Uncharacterized protein.
    
 0.763
CLCR_06912
Uncharacterized protein.
    
 0.729
CLCR_00611
Dynactin Arp1 p62 subunit RO2.
    
   0.565
CLCR_01683
Extracellular metalloprotease.
   
 0.559
CLCR_00612
3-phytase.
    
 0.545
ECM14
Putative metallocarboxypeptidase ECM14.
    
 0.545
GAD4
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.525
DPL1
Sphingosine-1-phosphate lyase.
   
 0.525
CLCR_11333
Putative cell polarity protein.
   
 0.524
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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