STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_07142Cell division cycle protein. (460 aa)    
Predicted Functional Partners:
GCD11
Eukaryotic translation initiation factor 2 subunit gamma.
    
 
 0.958
tif212
Putative eukaryotic translation initiation factor 2 subunit beta.
    
 
 0.876
csn5
COP9 signalosome complex subunit 5.
   
    0.659
CLCR_05644
FHA domain protein.
   
 
 0.540
CLCR_05174
Putative Nudix hydrolase P35G2.12; Belongs to the Nudix hydrolase family.
   
  
 0.524
CLCR_03033
Putative Nudix hydrolase P35G2.12.
   
  
 0.524
tif211
Eukaryotic translation initiation factor 2 subunit alpha.
   
 
 0.468
EFM4
Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.424
NUDT14
Nudix hydrolase 14, chloroplastic.
   
  
 0.415
NUDT14-2
Nudix hydrolase 14, chloroplastic.
   
  
 0.415
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.