STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBG2Ribosome-interacting GTPase 2. (487 aa)    
Predicted Functional Partners:
CLCR_08970
Putative RWD domain protein (Gir2).
   
 
 0.991
TMA46
Translation machinery-associated protein 46.
   
 
 0.960
gcn1
Translational activator gcn1.
   
 
 0.955
TEF3
Elongation factor 3.
   
 
 0.883
NEW1
[NU+] prion formation protein 1.
   
 
 0.878
dbp9
ATP-dependent RNA helicase dbp9.
   
   0.855
CLCR_03735
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.828
rps3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.825
RBG1
Ribosome-interacting GTPase 1.
  
  
0.777
CLCR_04232
60S ribosomal protein L5.
   
   0.772
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.