STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_07660Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
CLCR_07671
PPM-type phosphatase domain-containing protein.
 
      0.900
CLCR_07774
PPM-type phosphatase domain-containing protein.
 
      0.900
PAA1
Polyamine N-acetyltransferase 1.
    
   0.703
ndk1
Nucleoside diphosphate kinase.
    
 0.669
CLCR_02357
Baculoviral IAP repeat-containing 2/3/4.
    
 0.668
CLCR_05714
Uncharacterized protein.
    
 0.658
CLCR_05253
Uncharacterized protein.
    
 0.658
CLCR_04973
Ankyrin unc44.
    
 0.658
CLCR_10675
Serine/threonine protein kinase.
    
 0.658
aox1
Alternative oxidase.
    
 0.658
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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