Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_06711 | CLCR_07423 | A0A1C1CQN9 | A0A1C1CQ42 | Uncharacterized protein. | C6 zinc finger domain-containing protein. | 0.528 |
CLCR_06711 | myo2 | A0A1C1CQN9 | A0A1C1D334 | Uncharacterized protein. | Myosin type-2 heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.883 |
CLCR_07423 | CLCR_06711 | A0A1C1CQ42 | A0A1C1CQN9 | C6 zinc finger domain-containing protein. | Uncharacterized protein. | 0.528 |
CLCR_07423 | CLCR_08412 | A0A1C1CQ42 | A0A1C1CUS0 | C6 zinc finger domain-containing protein. | WD domain, G-beta repeat containing protein. | 0.669 |
CLCR_07423 | CLCR_09758 | A0A1C1CQ42 | A0A1C1CX96 | C6 zinc finger domain-containing protein. | CLP1_P domain-containing protein. | 0.569 |
CLCR_07423 | NOP7 | A0A1C1CQ42 | A0A1C1CC08 | C6 zinc finger domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.663 |
CLCR_07423 | NUG1 | A0A1C1CQ42 | A0A1C1CNY2 | C6 zinc finger domain-containing protein. | Nuclear GTP-binding protein NUG1. | 0.509 |
CLCR_07423 | ain1 | A0A1C1CQ42 | A0A1C1CPP3 | C6 zinc finger domain-containing protein. | Alpha-actinin-like protein 1. | 0.528 |
CLCR_07423 | erb1 | A0A1C1CQ42 | A0A1C1CYT5 | C6 zinc finger domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.595 |
CLCR_07423 | ipi1 | A0A1C1CQ42 | A0A1C1D2K5 | C6 zinc finger domain-containing protein. | Pre-rRNA-processing protein ipi1. | 0.641 |
CLCR_07423 | myo2 | A0A1C1CQ42 | A0A1C1D334 | C6 zinc finger domain-containing protein. | Myosin type-2 heavy chain 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.554 |
CLCR_07423 | ytm1 | A0A1C1CQ42 | A0A1C1CBV2 | C6 zinc finger domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.499 |
CLCR_08412 | CLCR_07423 | A0A1C1CUS0 | A0A1C1CQ42 | WD domain, G-beta repeat containing protein. | C6 zinc finger domain-containing protein. | 0.669 |
CLCR_08412 | CLCR_09758 | A0A1C1CUS0 | A0A1C1CX96 | WD domain, G-beta repeat containing protein. | CLP1_P domain-containing protein. | 0.985 |
CLCR_08412 | NOP7 | A0A1C1CUS0 | A0A1C1CC08 | WD domain, G-beta repeat containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.962 |
CLCR_08412 | NUG1 | A0A1C1CUS0 | A0A1C1CNY2 | WD domain, G-beta repeat containing protein. | Nuclear GTP-binding protein NUG1. | 0.985 |
CLCR_08412 | erb1 | A0A1C1CUS0 | A0A1C1CYT5 | WD domain, G-beta repeat containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.978 |
CLCR_08412 | ipi1 | A0A1C1CUS0 | A0A1C1D2K5 | WD domain, G-beta repeat containing protein. | Pre-rRNA-processing protein ipi1. | 0.999 |
CLCR_08412 | ytm1 | A0A1C1CUS0 | A0A1C1CBV2 | WD domain, G-beta repeat containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.968 |
CLCR_09758 | CLCR_07423 | A0A1C1CX96 | A0A1C1CQ42 | CLP1_P domain-containing protein. | C6 zinc finger domain-containing protein. | 0.569 |
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