STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldA-3Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (493 aa)    
Predicted Functional Partners:
CLCR_09677
Tryptophan synthase.
  
 
 0.852
CLCR_03412
Flavin-containing amine.
     
 0.742
Aldh6a1
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
  
0.741
facA
Acetyl-coenzyme A synthetase.
   
 0.723
ACSS3
Acyl-CoA synthetase short-chain family member 3, mitochondrial.
   
 0.723
gatA
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.713
CLCR_02413
3-hydroxyisobutyrate dehydrogenase.
   
 0.702
CLCR_03066
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 0.702
deoC
Deoxyribose-phosphate aldolase.
  
 0.680
GAD4
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.678
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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