Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_02625 | CLCR_03682 | A0A1C1CER6 | A0A1C1CH66 | RRM domain-containing protein. | Putative pre-mRNA-splicing factor srp1. | 0.900 |
CLCR_02625 | CLCR_04196 | A0A1C1CER6 | A0A1C1CHR2 | RRM domain-containing protein. | Isochorismatase hydrolase. | 0.906 |
CLCR_02625 | CLCR_05903 | A0A1C1CER6 | A0A1C1CA62 | RRM domain-containing protein. | RRM domain-containing protein. | 0.720 |
CLCR_02625 | CLCR_08902 | A0A1C1CER6 | A0A1C1CRC5 | RRM domain-containing protein. | NmrA-like family protein. | 0.561 |
CLCR_02625 | CLCR_10573 | A0A1C1CER6 | A0A1C1CXN2 | RRM domain-containing protein. | RNA recognition motif containing protein. | 0.468 |
CLCR_02625 | cef1 | A0A1C1CER6 | A0A1C1C8I2 | RRM domain-containing protein. | Pre-mRNA-splicing factor cef1. | 0.906 |
CLCR_02625 | rsd1 | A0A1C1CER6 | A0A1C1CP34 | RRM domain-containing protein. | RNA-binding protein rsd1. | 0.612 |
CLCR_03529 | CLCR_04196 | A0A1C1CGZ8 | A0A1C1CHR2 | C3H1-type domain-containing protein. | Isochorismatase hydrolase. | 0.635 |
CLCR_03529 | CLCR_08902 | A0A1C1CGZ8 | A0A1C1CRC5 | C3H1-type domain-containing protein. | NmrA-like family protein. | 0.401 |
CLCR_03529 | cef1 | A0A1C1CGZ8 | A0A1C1C8I2 | C3H1-type domain-containing protein. | Pre-mRNA-splicing factor cef1. | 0.635 |
CLCR_03682 | CLCR_02625 | A0A1C1CH66 | A0A1C1CER6 | Putative pre-mRNA-splicing factor srp1. | RRM domain-containing protein. | 0.900 |
CLCR_03682 | CLCR_04196 | A0A1C1CH66 | A0A1C1CHR2 | Putative pre-mRNA-splicing factor srp1. | Isochorismatase hydrolase. | 0.689 |
CLCR_03682 | CLCR_05903 | A0A1C1CH66 | A0A1C1CA62 | Putative pre-mRNA-splicing factor srp1. | RRM domain-containing protein. | 0.716 |
CLCR_03682 | CLCR_08902 | A0A1C1CH66 | A0A1C1CRC5 | Putative pre-mRNA-splicing factor srp1. | NmrA-like family protein. | 0.561 |
CLCR_03682 | cef1 | A0A1C1CH66 | A0A1C1C8I2 | Putative pre-mRNA-splicing factor srp1. | Pre-mRNA-splicing factor cef1. | 0.689 |
CLCR_03682 | rsd1 | A0A1C1CH66 | A0A1C1CP34 | Putative pre-mRNA-splicing factor srp1. | RNA-binding protein rsd1. | 0.402 |
CLCR_04196 | CLCR_02625 | A0A1C1CHR2 | A0A1C1CER6 | Isochorismatase hydrolase. | RRM domain-containing protein. | 0.906 |
CLCR_04196 | CLCR_03529 | A0A1C1CHR2 | A0A1C1CGZ8 | Isochorismatase hydrolase. | C3H1-type domain-containing protein. | 0.635 |
CLCR_04196 | CLCR_03682 | A0A1C1CHR2 | A0A1C1CH66 | Isochorismatase hydrolase. | Putative pre-mRNA-splicing factor srp1. | 0.689 |
CLCR_04196 | CLCR_05903 | A0A1C1CHR2 | A0A1C1CA62 | Isochorismatase hydrolase. | RRM domain-containing protein. | 0.647 |
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