STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_08750Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
pgiA
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 
  0.712
CLCR_11232
DOC domain-containing protein.
    
 0.608
RGN
Regucalcin.
   
 
 0.517
CLCR_07937
Ankyrin repeat protein nuc-2.
    
 0.490
plcN
Non-hemolytic phospholipase C.
    
  0.460
CLCR_05540
C6 transcription factor.
    
  0.459
BGL1B
Beta-glucosidase 1B; Belongs to the glycosyl hydrolase 1 family.
     
 0.459
CLCR_01104
Uncharacterized protein.
    
  0.459
CLCR_01821
Cutinase transcription factor 1 beta.
    
  0.459
CLCR_02050
Uncharacterized protein.
    
  0.459
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
Server load: low (40%) [HD]