STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_09075Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
GDE1
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.670
CLCR_07937
Ankyrin repeat protein nuc-2.
    
 0.633
CLCR_03807
RhoGAP domain containing protein.
    
 0.614
CLCR_05935
Serine/threonine-protein phosphatase.
    
  0.591
CLCR_05264
Ubiquitin-like domain-containing protein.
    
  0.560
ELC1
Elongin-C; Belongs to the SKP1 family.
    
  0.554
DCR2
Phosphatase DCR2.
    
 0.541
CLCR_10750
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
  0.528
CLCR_03124
NADH-ubiquinone oxidoreductase; Belongs to the complex I LYR family.
    
  0.515
CLCR_04401
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
    
  0.513
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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