Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARO7 | CLCR_02976 | A0A1C1C7H1 | A0A1C1D1S0 | Chorismate mutase. | Chorismate mutase/prephenate dehydratase. | 0.907 |
ARO7 | CLCR_08596 | A0A1C1C7H1 | A0A1C1CU84 | Chorismate mutase. | Chorismate synthase. | 0.980 |
ARO7 | Got2 | A0A1C1C7H1 | A0A1C1CI73 | Chorismate mutase. | Aspartate aminotransferase. | 0.883 |
ARO7 | LSP1 | A0A1C1C7H1 | A0A1C1CWP4 | Chorismate mutase. | Sphingolipid long chain base-responsive protein LSP1. | 0.885 |
ARO7 | aat2 | A0A1C1C7H1 | A0A1C1CRK1 | Chorismate mutase. | Aspartate aminotransferase. | 0.883 |
ARO7 | his3 | A0A1C1C7H1 | A0A1C1CFE9 | Chorismate mutase. | Histidinol-phosphate aminotransferase. | 0.921 |
ARO7 | trp4 | A0A1C1C7H1 | A0A1C1CSW0 | Chorismate mutase. | Anthranilate phosphoribosyltransferase. | 0.907 |
ARO7 | trpC | A0A1C1C7H1 | A0A1C1CAE8 | Chorismate mutase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.944 |
ARO7 | tyr1 | A0A1C1C7H1 | A0A1C1CRQ5 | Chorismate mutase. | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | 0.940 |
CLCR_02976 | ARO7 | A0A1C1D1S0 | A0A1C1C7H1 | Chorismate mutase/prephenate dehydratase. | Chorismate mutase. | 0.907 |
CLCR_02976 | CLCR_08596 | A0A1C1D1S0 | A0A1C1CU84 | Chorismate mutase/prephenate dehydratase. | Chorismate synthase. | 0.898 |
CLCR_02976 | Got2 | A0A1C1D1S0 | A0A1C1CI73 | Chorismate mutase/prephenate dehydratase. | Aspartate aminotransferase. | 0.854 |
CLCR_02976 | aat2 | A0A1C1D1S0 | A0A1C1CRK1 | Chorismate mutase/prephenate dehydratase. | Aspartate aminotransferase. | 0.854 |
CLCR_02976 | his3 | A0A1C1D1S0 | A0A1C1CFE9 | Chorismate mutase/prephenate dehydratase. | Histidinol-phosphate aminotransferase. | 0.889 |
CLCR_02976 | trp4 | A0A1C1D1S0 | A0A1C1CSW0 | Chorismate mutase/prephenate dehydratase. | Anthranilate phosphoribosyltransferase. | 0.871 |
CLCR_02976 | trpC | A0A1C1D1S0 | A0A1C1CAE8 | Chorismate mutase/prephenate dehydratase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.934 |
CLCR_02976 | tyr1 | A0A1C1D1S0 | A0A1C1CRQ5 | Chorismate mutase/prephenate dehydratase. | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | 0.907 |
CLCR_08596 | ARO7 | A0A1C1CU84 | A0A1C1C7H1 | Chorismate synthase. | Chorismate mutase. | 0.980 |
CLCR_08596 | CLCR_02976 | A0A1C1CU84 | A0A1C1D1S0 | Chorismate synthase. | Chorismate mutase/prephenate dehydratase. | 0.898 |
CLCR_08596 | Got2 | A0A1C1CU84 | A0A1C1CI73 | Chorismate synthase. | Aspartate aminotransferase. | 0.489 |
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