STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ste16Protein ste16. (1317 aa)    
Predicted Functional Partners:
CLCR_08540
Target of rapamycin complex subunit LST8.
    
 0.999
CLCR_09625
Stress activated MAP kinase interacting protein.
    
 0.999
rrp6
Exosome complex exonuclease rrp6.
   
 0.983
tor
Target of rapamycin; Belongs to the PI3/PI4-kinase family.
   
 0.983
CLCR_08832
Ankyrin repeat containing protein.
    
 
 0.836
CLCR_08533
Putative cellobiose dehydrogenase.
 
  
 0.829
CLCR_00569
Protein HbrB.
    
 0.822
CLCR_01641
Integral membrane protein.
    
 0.804
Rps6kb1
Ribosomal protein S6 kinase beta-1.
    
 0.804
sck1
Non-specific serine/threonine protein kinase.
    
 0.804
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.