STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_08513Putative lactate 2-monooxygenase PB1A11.03. (444 aa)    
Predicted Functional Partners:
CYB2-6
Cytochrome b2, mitochondrial.
  
  
 
0.762
CYB2-4
Cytochrome b2, mitochondrial.
  
  
 
0.753
facA
Acetyl-coenzyme A synthetase.
   
 
 0.728
aldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.722
CLCR_04510
Putative aldehyde dehydrogenase.
   
 
  0.722
CLCR_09984
Probable acetate kinase.
   
 
  0.710
CYB2-3
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
  
  
 
0.674
LDHA
L-lactate dehydrogenase A; Belongs to the LDH/MDH superfamily.
   
 
 0.666
CYB2
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
  
  
 
0.664
CYB2-2
Cytochrome b2, mitochondrial.
  
  
 
0.656
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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