Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG8 | CLCR_03082 | A0A1C1CZY8 | A0A1C1D1S8 | Autophagy-related protein. | DUF1649 domain protein. | 0.614 |
ATG8 | CLCR_05348 | A0A1C1CZY8 | A0A1C1C845 | Autophagy-related protein. | Putative kinase with calcium binding domain. | 0.832 |
ATG8 | CLCR_05618 | A0A1C1CZY8 | A0A1C1CAD3 | Autophagy-related protein. | Putative UV radiation resistance protein (UVRAG). | 0.792 |
ATG8 | VPS34 | A0A1C1CZY8 | A0A1C1C754 | Autophagy-related protein. | Phosphatidylinositol 3-kinase VPS34. | 0.896 |
ATG8 | atg1 | A0A1C1CZY8 | A0A1C1CC57 | Autophagy-related protein. | Serine/threonine-protein kinase atg1. | 0.997 |
ATG8 | atg12 | A0A1C1CZY8 | A0A1C1CXL5 | Autophagy-related protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | 0.957 |
ATG8 | atg18 | A0A1C1CZY8 | A0A1C1C7I9 | Autophagy-related protein. | Autophagy-related protein 18. | 0.912 |
ATG8 | atg3 | A0A1C1CZY8 | A0A1C1CPL9 | Autophagy-related protein. | Autophagy-related protein 3. | 0.999 |
ATG8 | atg6 | A0A1C1CZY8 | A0A1C1CS25 | Autophagy-related protein. | Vacuolar protein sorting-associated protein atg6. | 0.900 |
CLCR_03082 | ATG8 | A0A1C1D1S8 | A0A1C1CZY8 | DUF1649 domain protein. | Autophagy-related protein. | 0.614 |
CLCR_03082 | CLCR_05348 | A0A1C1D1S8 | A0A1C1C845 | DUF1649 domain protein. | Putative kinase with calcium binding domain. | 0.887 |
CLCR_03082 | CLCR_05618 | A0A1C1D1S8 | A0A1C1CAD3 | DUF1649 domain protein. | Putative UV radiation resistance protein (UVRAG). | 0.562 |
CLCR_03082 | VPS34 | A0A1C1D1S8 | A0A1C1C754 | DUF1649 domain protein. | Phosphatidylinositol 3-kinase VPS34. | 0.902 |
CLCR_03082 | atg1 | A0A1C1D1S8 | A0A1C1CC57 | DUF1649 domain protein. | Serine/threonine-protein kinase atg1. | 0.998 |
CLCR_03082 | atg12 | A0A1C1D1S8 | A0A1C1CXL5 | DUF1649 domain protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | 0.586 |
CLCR_03082 | atg18 | A0A1C1D1S8 | A0A1C1C7I9 | DUF1649 domain protein. | Autophagy-related protein 18. | 0.566 |
CLCR_03082 | atg3 | A0A1C1D1S8 | A0A1C1CPL9 | DUF1649 domain protein. | Autophagy-related protein 3. | 0.521 |
CLCR_03082 | atg6 | A0A1C1D1S8 | A0A1C1CS25 | DUF1649 domain protein. | Vacuolar protein sorting-associated protein atg6. | 0.901 |
CLCR_05348 | ATG8 | A0A1C1C845 | A0A1C1CZY8 | Putative kinase with calcium binding domain. | Autophagy-related protein. | 0.832 |
CLCR_05348 | CLCR_03082 | A0A1C1C845 | A0A1C1D1S8 | Putative kinase with calcium binding domain. | DUF1649 domain protein. | 0.887 |
page 1 of 5