Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_03795 | CLCR_03862 | A0A1C1CJ69 | A0A1C1CIH2 | DNA polymerase. | Putative DNA polymerase epsilon subunit B. | 0.963 |
CLCR_03795 | CLCR_08443 | A0A1C1CJ69 | A0A1C1CS34 | DNA polymerase. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.974 |
CLCR_03795 | mcm2 | A0A1C1CJ69 | A0A1C1CXS2 | DNA polymerase. | DNA helicase; Belongs to the MCM family. | 0.960 |
CLCR_03795 | mcm7 | A0A1C1CJ69 | A0A1C1CC10 | DNA polymerase. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.929 |
CLCR_03795 | pol1 | A0A1C1CJ69 | A0A1C1CRY0 | DNA polymerase. | DNA polymerase. | 0.496 |
CLCR_03795 | pol12 | A0A1C1CJ69 | A0A1C1C9M2 | DNA polymerase. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.953 |
CLCR_03795 | pol2 | A0A1C1CJ69 | A0A1C1CR22 | DNA polymerase. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.885 |
CLCR_03795 | pol3 | A0A1C1CJ69 | A0A1C1CAC2 | DNA polymerase. | DNA polymerase. | 0.813 |
CLCR_03795 | pri1 | A0A1C1CJ69 | A0A1C1CH20 | DNA polymerase. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.953 |
CLCR_03795 | ssb2 | A0A1C1CJ69 | A0A1C1CA83 | DNA polymerase. | Replication factor A protein 2. | 0.828 |
CLCR_03862 | CLCR_03795 | A0A1C1CIH2 | A0A1C1CJ69 | Putative DNA polymerase epsilon subunit B. | DNA polymerase. | 0.963 |
CLCR_03862 | CLCR_08443 | A0A1C1CIH2 | A0A1C1CS34 | Putative DNA polymerase epsilon subunit B. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.970 |
CLCR_03862 | mcm2 | A0A1C1CIH2 | A0A1C1CXS2 | Putative DNA polymerase epsilon subunit B. | DNA helicase; Belongs to the MCM family. | 0.996 |
CLCR_03862 | mcm7 | A0A1C1CIH2 | A0A1C1CC10 | Putative DNA polymerase epsilon subunit B. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.986 |
CLCR_03862 | pol1 | A0A1C1CIH2 | A0A1C1CRY0 | Putative DNA polymerase epsilon subunit B. | DNA polymerase. | 0.983 |
CLCR_03862 | pol12 | A0A1C1CIH2 | A0A1C1C9M2 | Putative DNA polymerase epsilon subunit B. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.923 |
CLCR_03862 | pol2 | A0A1C1CIH2 | A0A1C1CR22 | Putative DNA polymerase epsilon subunit B. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.999 |
CLCR_03862 | pol3 | A0A1C1CIH2 | A0A1C1CAC2 | Putative DNA polymerase epsilon subunit B. | DNA polymerase. | 0.964 |
CLCR_03862 | pri1 | A0A1C1CIH2 | A0A1C1CH20 | Putative DNA polymerase epsilon subunit B. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.959 |
CLCR_03862 | ssb2 | A0A1C1CIH2 | A0A1C1CA83 | Putative DNA polymerase epsilon subunit B. | Replication factor A protein 2. | 0.833 |
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