STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpnB-3Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. (573 aa)    
Predicted Functional Partners:
CLCR_04211
AB hydrolase superfamily protein.
 
 
 
  0.757
CLCR_05984
AB hydrolase superfamily protein.
 
 
 
  0.680
estA
Versiconal hemiacetal acetate esterase.
 
 
 
  0.589
CLCR_03603
Alpha/beta hydrolase fold-3 domain-containing protein.
 
 
 
  0.477
coq6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
   
 0.407
CLCR_04989
Epoxide hydrolase 2.
   
  0.406
CLCR_08815
Putative epoxide hydrolase.
   
  0.406
CLCR_10439
Epoxide hydrolase.
   
  0.406
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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