Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_03603 | cpnB-3 | A0A1C1CGG6 | A0A1C1CS46 | Alpha/beta hydrolase fold-3 domain-containing protein. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.477 |
CLCR_04211 | cpnB-3 | A0A1C1CIH9 | A0A1C1CS46 | AB hydrolase superfamily protein. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.757 |
CLCR_04989 | CLCR_08815 | A0A1C1CJQ0 | A0A1C1CR61 | Epoxide hydrolase 2. | Putative epoxide hydrolase. | 0.840 |
CLCR_04989 | CLCR_10439 | A0A1C1CJQ0 | A0A1C1CYQ2 | Epoxide hydrolase 2. | Epoxide hydrolase. | 0.843 |
CLCR_04989 | cpnB-3 | A0A1C1CJQ0 | A0A1C1CS46 | Epoxide hydrolase 2. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.406 |
CLCR_05984 | cpnB-3 | A0A1C1C8P4 | A0A1C1CS46 | AB hydrolase superfamily protein. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.680 |
CLCR_08815 | CLCR_04989 | A0A1C1CR61 | A0A1C1CJQ0 | Putative epoxide hydrolase. | Epoxide hydrolase 2. | 0.840 |
CLCR_08815 | CLCR_10439 | A0A1C1CR61 | A0A1C1CYQ2 | Putative epoxide hydrolase. | Epoxide hydrolase. | 0.837 |
CLCR_08815 | cpnB-3 | A0A1C1CR61 | A0A1C1CS46 | Putative epoxide hydrolase. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.406 |
CLCR_10439 | CLCR_04989 | A0A1C1CYQ2 | A0A1C1CJQ0 | Epoxide hydrolase. | Epoxide hydrolase 2. | 0.843 |
CLCR_10439 | CLCR_08815 | A0A1C1CYQ2 | A0A1C1CR61 | Epoxide hydrolase. | Putative epoxide hydrolase. | 0.837 |
CLCR_10439 | cpnB-3 | A0A1C1CYQ2 | A0A1C1CS46 | Epoxide hydrolase. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.406 |
coq6 | cpnB-3 | A0A1C1CJN6 | A0A1C1CS46 | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | 0.407 |
cpnB-3 | CLCR_03603 | A0A1C1CS46 | A0A1C1CGG6 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | Alpha/beta hydrolase fold-3 domain-containing protein. | 0.477 |
cpnB-3 | CLCR_04211 | A0A1C1CS46 | A0A1C1CIH9 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | AB hydrolase superfamily protein. | 0.757 |
cpnB-3 | CLCR_04989 | A0A1C1CS46 | A0A1C1CJQ0 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | Epoxide hydrolase 2. | 0.406 |
cpnB-3 | CLCR_05984 | A0A1C1CS46 | A0A1C1C8P4 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | AB hydrolase superfamily protein. | 0.680 |
cpnB-3 | CLCR_08815 | A0A1C1CS46 | A0A1C1CR61 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | Putative epoxide hydrolase. | 0.406 |
cpnB-3 | CLCR_10439 | A0A1C1CS46 | A0A1C1CYQ2 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | Epoxide hydrolase. | 0.406 |
cpnB-3 | coq6 | A0A1C1CS46 | A0A1C1CJN6 | Cyclopentanone 1,2-monooxygenase; Belongs to the FMO family. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | 0.407 |
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