STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_08899Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
CLCR_05379
UV-damaged DNA binding protein.
    
 
 0.537
CLCR_05565
WD domain protein.
    
 
 0.533
CLCR_07974
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 
 0.524
CUL4A
Cullin-4A; Belongs to the cullin family.
    
 
 0.493
csnA
COP9 signalosome complex subunit 1.
    
 
 0.485
CLCR_07589
N-acetyltransferase domain-containing protein.
    
 
 0.479
rad3
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
 
 0.417
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.