STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_08787PIPK domain-containing protein. (349 aa)    
Predicted Functional Partners:
CLCR_10864
Uncharacterized protein.
   
 0.954
stt4
Phosphatidylinositol 4-kinase stt4; Belongs to the PI3/PI4-kinase family.
   
 0.873
SRPR
Signal recognition particle receptor subunit alpha.
    
 0.838
CLCR_09887
Phosphoinositide phosphatase Pten/Tep1.
   
 0.818
SAC1
Phosphoinositide phosphatase SAC1.
    
 0.815
ARF6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.813
CLCR_01779
Phosphatidylinositol-4-phosphate 5-Kinase family protein.
     
 0.804
syj1
Inositol-1,4,5-trisphosphate 5-phosphatase 1.
    
 0.804
srpA-2
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
     
 0.786
CLCR_02726
Phosphatase family protein.
     
 0.764
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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