STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mnh1Protein mago nashi like protein. (154 aa)    
Predicted Functional Partners:
CLCR_06301
Putative transformer-SR ribonucleoprotein.
   
 0.999
fal1
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
   
 0.997
Wibg
Partner of Y14 and mago.
    
 
 0.983
CLCR_06546
RanBD1 domain-containing protein.
   
 
  0.982
tif1
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.940
CLCR_02732
Uncharacterized protein.
    
 
 0.933
CLCR_06460
mRNA export factor Mlo3.
   
 0.930
CLCR_06423
FoP_duplication domain-containing protein.
   
 0.930
CLCR_03028
RNA recognition motif containing protein.
   
 0.930
CLCR_02346
Uncharacterized protein.
   
 0.927
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.