STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_11363Cytochrome P450; Belongs to the cytochrome P450 family. (550 aa)    
Predicted Functional Partners:
NIAD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.814
TRI4
Trichodiene oxygenase; Belongs to the cytochrome P450 family.
  
 
  0.649
ERG7
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.616
ERG1
Squalene monooxygenase.
   
 0.615
sts1
Delta(24(24(1)))-sterol reductase.
    
 0.604
CLCR_01874
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
  0.603
CLCR_05811
Cytochrome P450 76C3; Belongs to the cytochrome P450 family.
  
 
  0.601
TRI4-3
Trichodiene oxygenase; Belongs to the cytochrome P450 family.
  
 
  0.594
CLCR_03711
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.582
CLCR_01122
25-hydroxyvitamin D-1 alpha hydroxylase; Belongs to the cytochrome P450 family.
  
 
  0.577
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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