Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01182 | NIAD | A0A1C1CCJ3 | A0A1C1CCF1 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.944 |
CLCR_01182 | OLE1 | A0A1C1CCJ3 | A0A1C1CQS6 | Uncharacterized protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.851 |
CLCR_01182 | RDH12 | A0A1C1CCJ3 | A0A1C1CUS9 | Uncharacterized protein. | Retinol dehydrogenase 12. | 0.557 |
CLCR_01182 | Rdh12-2 | A0A1C1CCJ3 | A0A1C1CFR2 | Uncharacterized protein. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.557 |
CLCR_01190 | OLE1 | A0A1C1CCP2 | A0A1C1CQS6 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.513 |
CLCR_01190 | RDH12 | A0A1C1CCP2 | A0A1C1CUS9 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Retinol dehydrogenase 12. | 0.588 |
CLCR_01190 | Rdh12-2 | A0A1C1CCP2 | A0A1C1CFR2 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.588 |
CLCR_01765 | NIAD | A0A1C1CBE4 | A0A1C1CCF1 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.944 |
CLCR_01765 | OLE1 | A0A1C1CBE4 | A0A1C1CQS6 | Uncharacterized protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.851 |
CLCR_01765 | RDH12 | A0A1C1CBE4 | A0A1C1CUS9 | Uncharacterized protein. | Retinol dehydrogenase 12. | 0.557 |
CLCR_01765 | Rdh12-2 | A0A1C1CBE4 | A0A1C1CFR2 | Uncharacterized protein. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.557 |
CLCR_04240 | RDH12 | A0A1C1CJ93 | A0A1C1CUS9 | Protein kinase domain-containing protein. | Retinol dehydrogenase 12. | 0.507 |
CLCR_04240 | Rdh12-2 | A0A1C1CJ93 | A0A1C1CFR2 | Protein kinase domain-containing protein. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.507 |
CLCR_06218 | OLE1 | A0A1C1C6Y2 | A0A1C1CQS6 | BZIP domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.789 |
CLCR_06218 | RDH12 | A0A1C1C6Y2 | A0A1C1CUS9 | BZIP domain-containing protein. | Retinol dehydrogenase 12. | 0.451 |
CLCR_06218 | Rdh12-2 | A0A1C1C6Y2 | A0A1C1CFR2 | BZIP domain-containing protein. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.451 |
CLCR_06234 | OLE1 | A0A1C1C9A6 | A0A1C1CQS6 | BZIP domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.789 |
CLCR_06234 | RDH12 | A0A1C1C9A6 | A0A1C1CUS9 | BZIP domain-containing protein. | Retinol dehydrogenase 12. | 0.451 |
CLCR_06234 | Rdh12-2 | A0A1C1C9A6 | A0A1C1CFR2 | BZIP domain-containing protein. | Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.451 |
CLCR_08977 | RDH12 | A0A1C1CUH9 | A0A1C1CUS9 | Dihydrofolate reductase. | Retinol dehydrogenase 12. | 0.608 |
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