STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRE6Proteasome subunit alpha type. (274 aa)    
Predicted Functional Partners:
PRE7
Proteasome subunit beta type-6.
   
 0.999
PRE2
Proteasome subunit beta.
   
 0.999
PRE10
Proteasome subunit alpha type.
   
0.999
PRE3
Proteasome subunit beta.
   
 0.999
RPN10
26S proteasome regulatory subunit RPN10.
   
 0.999
CLCR_11270
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
  
0.999
CLCR_04217
Proteasome subunit alpha type.
  
0.999
PUP2
Proteasome subunit alpha type.
   
0.999
PUP1
Proteasome subunit beta type-2.
   
 0.999
CLCR_00915
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.