STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABB1BRas-related protein RABB1b. (262 aa)    
Predicted Functional Partners:
CLCR_03807
RhoGAP domain containing protein.
    
 0.980
CLCR_06912
Uncharacterized protein.
   
 0.906
rga1
Rho-type GTPase-activating protein 1.
    
 0.854
CLCR_01218
Golgi reassembly stacking protein.
   
 0.840
CLCR_02256
Putative GTPase activating protein (Evi5).
    
 0.826
ryh1
GTP-binding protein ryh1.
  
0.820
CLCR_08302
ATP synthase regulation protein NCA2.
 
 
 0.820
CLCR_06358
Rho GDP-dissociation inhibitor.
   
 0.797
ypt2
GTP-binding protein ypt2.
  
0.785
CLCR_00426
Uncharacterized protein.
    
 0.777
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.