STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_09805Cell wall anchored protein. (620 aa)    
Predicted Functional Partners:
slt11
Pre-mRNA-splicing factor slt11.
   
 0.844
CLCR_04101
Uncharacterized protein.
    
 0.789
CLCR_08234
PAS domain-containing protein.
    
 0.789
CLCR_07995
Uncharacterized protein.
    
 0.789
CLCR_10751
Kinetochore protein fta4.
    
 0.789
CLCR_05151
Putative oxidoreductase.
    
 0.780
CLCR_04642
Heat shock protein 90 like protein.
    
 0.780
CLCR_04240
Protein kinase domain-containing protein.
    
 0.763
CLCR_09447
JmjC domain containing protein.
    
 0.754
CLCR_10909
JmjN domain-containing protein.
    
 0.754
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.