STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_10721Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
CLCR_09441
Putative PHD finger and BAH domain protein (Snt2).
 
      0.899
PAY32
Peroxisomal targeting signal receptor.
    
  0.590
AGX1
Alanine--glyoxylate aminotransferase 1.
   
 0.588
AGX1-2
Alanine--glyoxylate aminotransferase 1.
   
 0.588
mvd1
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
    
 0.573
rrp5
rRNA biogenesis protein rrp5.
  
 
  0.562
acuE
Malate synthase; Belongs to the malate synthase family.
   
 
 0.550
pkiA
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.544
GAMP
Glucoamylase.
   
 
 0.544
SCP2
Fatty acid-binding protein.
   
 
 0.542
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.