STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_10745Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
CLCR_10795
APH domain-containing protein.
 
     0.931
ubx1
UBX domain-containing protein 1.
    
   0.667
GCDH
Glutaryl-CoA dehydrogenase, mitochondrial.
   
 0.651
CLCR_02426
AlcB domain-containing protein.
    
  0.641
CLCR_04002
Putative siderophore biosynthesis protein.
    
  0.641
CLCR_11311
Uncharacterized protein.
  
 0.620
etr1
Putative trans-2-enoyl-CoA reductase, mitochondrial.
   
  0.593
echs1
Putative enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.583
mri1
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
  
 
  0.574
SCP2
Fatty acid-binding protein.
  
 0.573
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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