STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_00855Fungal_trans domain-containing protein. (470 aa)    
Predicted Functional Partners:
CLCR_02912
Uncharacterized protein.
    
 0.850
CLCR_00914
Zn(2)-C6 fungal-type domain-containing protein.
 
     0.793
CLCR_11244
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
    
 0.694
CLCR_04536
Protein kinase domain-containing protein.
   
 0.656
CLCR_00476
14-3-3 protein like protein; Belongs to the 14-3-3 family.
    
 0.644
CLCR_03622
14-3-3 protein like protein; Belongs to the 14-3-3 family.
    
 0.644
CLCR_08627
14-3-3-like protein.
    
 0.644
CLCR_08275
NAD-dependent protein deacetylase hst4.
    
 0.635
SIR2
NAD-dependent histone deacetylase SIR2.
    
 0.635
CLCR_10543
NAD-dependent protein deacylase.
    
 0.635
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.