STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maoNAmine oxidase. (498 aa)    
Predicted Functional Partners:
CLCR_09677
Tryptophan synthase.
     
 0.814
CLCR_09434
Chromodomain-helicase-DNA-binding protein.
    
 0.780
htb1
Histone H2B; Belongs to the histone H2B family.
    
  0.767
hat2
Histone acetyltransferase type B subunit 2.
    
 0.729
CLCR_09447
JmjC domain containing protein.
   
 0.721
CLCR_10909
JmjN domain-containing protein.
   
 0.721
RPD3
Histone deacetylase RPD3.
    
 0.688
HOS2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.688
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.655
CLCR_02433
GRF zinc finger domain-containing protein.
    
 0.655
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.