STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXTranscription factor like protein RFX-Penicillium chrysogenum. (719 aa)    
Predicted Functional Partners:
CLCR_04535
Protein kinase.
    
 0.949
rad3
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
 
 0.911
CLCR_00790
Serine/threonine-protein kinase chk2.
    
 0.904
CLCR_03110
Uncharacterized protein.
 
      0.892
CLCR_01308
Uncharacterized protein.
    
 0.859
CLCR_04777
Putative camk family protein kinase protein.
    
 0.805
CLCR_02725
Leucine rich repeat protein.
    
 0.796
CLCR_09626
Putative forkhead transcription factor Fkh1/2.
  
 
 
 0.679
MOT1
TATA-binding protein-associated factor MOT1.
    
   0.597
CLCR_06841
WD repeat-containing protein.
    
 
 0.513
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.