STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02933Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
EGD2
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.991
RPL31B
60S ribosomal protein L31-B.
   
 
 0.969
rpl25b
60S ribosomal protein L25-B.
   
 
 0.957
RPL6B
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.939
CLCR_11218
60S ribosomal protein L32.
   
   0.931
rpl21b
60S ribosomal protein L21-B.
   
   0.928
CLCR_05344
Nuclear pore complex protein.
   
 
 0.922
CLCR_07935
Nuclear pore complex protein An-Nic96.
   
   0.922
CLCR_07902
Putative nucleoporin.
    
   0.921
RPL14A
60S ribosomal protein L14-A.
   
 
 0.907
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.