STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02825Mitochondrial protein Fmp25. (623 aa)    
Predicted Functional Partners:
CLCR_06546
RanBD1 domain-containing protein.
   
 0.911
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.909
NOP9
Nucleolar protein 9.
 
      0.895
CLCR_09930
Group II pyridoxal-5-phosphate decarboxylase.
 
      0.888
cut15
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.752
nimA
G2-specific protein kinase nimA.
    
 0.706
CLCR_09508
Uncharacterized protein.
    
 0.706
nudC
Nuclear movement protein nudC.
    
  0.691
dph4
Diphthamide biosynthesis protein 4.
    
 
 0.683
CLCR_04536
Protein kinase domain-containing protein.
    
 0.681
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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