STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02950DUF207 domain protein. (454 aa)    
Predicted Functional Partners:
CLCR_05797
tRNA wybutosine-synthesizing protein.
  
 
 0.715
TYW1
tRNA wybutosine-synthesizing protein 1.
  
  
 0.646
TRM7
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.509
CLCR_05561
tRNA(M5U54)methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
  
 0.505
CLCR_06110
Uncharacterized protein.
   
    0.499
CLCR_06682
Putative pseudouridine synthase TruD/Pus7.
   
  
 0.497
img2
54S ribosomal protein img2, mitochondrial.
      
 0.487
CLCR_08078
N2,N2-dimethylguanosine tRNA methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.470
CLCR_02926
Uncharacterized protein.
      
 0.454
glnA2
Type-1 glutamine synthetase 2; Belongs to the glutamine synthetase family.
      
 0.438
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.