STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02758Uncharacterized protein. (896 aa)    
Predicted Functional Partners:
CLCR_07937
Ankyrin repeat protein nuc-2.
    
 0.959
GDE1
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.889
ku80
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.811
PHO85
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.807
CLCR_10990
Protein kinase domain-containing protein.
    
 0.807
CLCR_10754
Putative Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.807
atg1
Serine/threonine-protein kinase atg1.
    
  0.795
ku70
ATP-dependent DNA helicase II subunit 1.
    
 0.704
LIG4
DNA ligase.
    
 0.699
CLCR_01392
ATP-dependent DNA ligase domain protein.
    
 0.699
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.