STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH5Phosphatidylinositol transfer protein SFH5. (363 aa)    
Predicted Functional Partners:
CLCR_04754
Uncharacterized protein.
    
 0.705
sec14
Sec14 cytosolic factor.
    
 
 0.680
APL4
AP-1 complex subunit gamma.
    
 0.676
CLCR_00479
Uncharacterized protein.
     
 0.647
chc1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.647
CLCR_09903
Phosphatidylinositol transfer protein.
    
 
 0.630
CLCR_02830
CRAL/TRIO domain containing protein.
    
 
 0.579
GDE1
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.565
PDR16
Phosphatidylinositol transfer protein PDR16.
    
 
 0.558
CLCR_00501
Adaptin_N domain-containing protein.
    
 0.529
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.