Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT38834.1 | SFT49252.1 | SAMN04515657_0250 | SAMN04515657_0832 | Hypothetical protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.764 |
SFT38834.1 | fadA | SAMN04515657_0250 | SAMN04515657_1505 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.794 |
SFT38834.1 | fadI | SAMN04515657_0250 | SAMN04515657_0165 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.828 |
SFT38834.1 | fadJ | SAMN04515657_0250 | SAMN04515657_0166 | Hypothetical protein. | Short chain enoyl-CoA hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.993 |
SFT41199.1 | SFT49252.1 | SAMN04515657_0378 | SAMN04515657_0832 | Hypothetical protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.763 |
SFT41199.1 | SFT79245.1 | SAMN04515657_0378 | SAMN04515657_2208 | Hypothetical protein. | Hypothetical protein. | 0.426 |
SFT41199.1 | fadA | SAMN04515657_0378 | SAMN04515657_1505 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.763 |
SFT41199.1 | fadI | SAMN04515657_0378 | SAMN04515657_0165 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.763 |
SFT41199.1 | fadJ | SAMN04515657_0378 | SAMN04515657_0166 | Hypothetical protein. | Short chain enoyl-CoA hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.988 |
SFT49189.1 | SFT49252.1 | SAMN04515657_0829 | SAMN04515657_0832 | Hypothetical protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.806 |
SFT49189.1 | fadA | SAMN04515657_0829 | SAMN04515657_1505 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.797 |
SFT49189.1 | fadI | SAMN04515657_0829 | SAMN04515657_0165 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.764 |
SFT49189.1 | fadJ | SAMN04515657_0829 | SAMN04515657_0166 | Hypothetical protein. | Short chain enoyl-CoA hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.991 |
SFT49252.1 | SFT38834.1 | SAMN04515657_0832 | SAMN04515657_0250 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.764 |
SFT49252.1 | SFT41199.1 | SAMN04515657_0832 | SAMN04515657_0378 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.763 |
SFT49252.1 | SFT49189.1 | SAMN04515657_0832 | SAMN04515657_0829 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.806 |
SFT49252.1 | SFT49971.1 | SAMN04515657_0832 | SAMN04515657_0871 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase. | 0.877 |
SFT49252.1 | SFT67131.1 | SAMN04515657_0832 | SAMN04515657_1636 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | glutaryl-CoA dehydrogenase. | 0.764 |
SFT49252.1 | SFT79245.1 | SAMN04515657_0832 | SAMN04515657_2208 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.800 |
SFT49252.1 | fadA | SAMN04515657_0832 | SAMN04515657_1505 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. | 0.837 |
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