STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT42909.1Protein of unknown function. (166 aa)    
Predicted Functional Partners:
SFT42821.1
Ketosteroid isomerase-related protein.
 
   
 0.851
SFT42962.1
Protein of unknown function.
 
     0.843
SFT42880.1
Hypothetical protein.
 
   
 0.833
SFT42896.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.820
SFT42860.1
Predicted NAD/FAD-binding protein.
 
   
 0.818
SFT42843.1
Short-chain dehydrogenase.
 
   
 0.808
SFT42941.1
Chalcone isomerase-like.
       0.801
SFT42784.1
Uncharacterized conserved protein YbgA, DUF1722 family.
       0.792
SFT42801.1
Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family.
       0.742
SFT42980.1
KOW motif-containing protein.
       0.557
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.