STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT46828.1Phenylalanine 4-hydroxylase. (264 aa)    
Predicted Functional Partners:
SFT46806.1
Pterin-4-alpha-carbinolamine dehydratase.
 
 0.995
SFT46743.1
Homogentisate 1,2-dioxygenase.
 
  
 0.946
SFT46761.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.944
SFT50788.1
Chorismate mutase / prephenate dehydrogenase.
     
 0.891
SFT46704.1
Maleylacetoacetate isomerase.
 
 
 0.874
SFT51882.1
Aspartate aminotransferase.
   
 
 0.818
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.802
hisC-2
Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.802
SFT65526.1
Prephenate dehydratase.
     
 0.800
SFT46726.1
Fumarylacetoacetate (FAA) hydrolase.
 
  
 0.791
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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