STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT47043.1Cationic peptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
SFT47024.1
Cationic peptide transport system permease protein.
 
 0.999
SFT47007.1
Cationic peptide transport system permease protein.
 
  
  0.997
SFT47059.1
Cationic peptide transport system ATP-binding protein.
 
 
0.996
SFT46988.1
Cationic peptide transport system substrate-binding protein.
 
 
 0.986
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
  
 
0.957
SFT51470.1
Putative ABC transport system ATP-binding protein.
 
    
0.909
SFT71297.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
    
0.906
SFT67280.1
Molybdate transport system ATP-binding protein.
 
  
 
0.894
SFT46967.1
Psp operon transcriptional activator.
       0.853
SFT47080.1
solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.742
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.