STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT51537.1Hypothetical protein; Belongs to the UPF0753 family. (755 aa)    
Predicted Functional Partners:
SFT51548.1
NAD(P)H-quinone oxidoreductase subunit 5.
 
 0.979
SFT51564.1
LysR family transcriptional regulator, transcriptional activator of nhaA; Belongs to the LysR transcriptional regulatory family.
 
     0.898
SFT51524.1
Hypothetical protein.
       0.808
SFT51510.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
    0.783
SFT78760.1
Deoxyribodipyrimidine photolyase-related protein; Manually curated.
  
     0.577
SFT80649.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
  
 
 0.509
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.