Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT47824.1 | SFT52738.1 | SAMN04515657_0746 | SAMN04515657_1068 | TonB family C-terminal domain-containing protein. | Hypothetical protein. | 0.660 |
SFT47824.1 | SFT52751.1 | SAMN04515657_0746 | SAMN04515657_1069 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.599 |
SFT47824.1 | SFT52770.1 | SAMN04515657_0746 | SAMN04515657_1070 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbD. | 0.799 |
SFT47824.1 | SFT52786.1 | SAMN04515657_0746 | SAMN04515657_1071 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbB. | 0.782 |
SFT47824.1 | SFT52802.1 | SAMN04515657_0746 | SAMN04515657_1072 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbB. | 0.846 |
SFT47824.1 | SFT52816.1 | SAMN04515657_0746 | SAMN04515657_1073 | TonB family C-terminal domain-containing protein. | Protein of unknown function. | 0.623 |
SFT47824.1 | SFT59473.1 | SAMN04515657_0746 | SAMN04515657_1282 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.415 |
SFT47824.1 | SFT59506.1 | SAMN04515657_0746 | SAMN04515657_1284 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbB. | 0.760 |
SFT47824.1 | SFT59516.1 | SAMN04515657_0746 | SAMN04515657_1285 | TonB family C-terminal domain-containing protein. | Outer membrane transport energization protein ExbB. | 0.780 |
SFT47824.1 | tolQ | SAMN04515657_0746 | SAMN04515657_0069 | TonB family C-terminal domain-containing protein. | Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.570 |
SFT52738.1 | SFT47824.1 | SAMN04515657_1068 | SAMN04515657_0746 | Hypothetical protein. | TonB family C-terminal domain-containing protein. | 0.660 |
SFT52738.1 | SFT52751.1 | SAMN04515657_1068 | SAMN04515657_1069 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.966 |
SFT52738.1 | SFT52770.1 | SAMN04515657_1068 | SAMN04515657_1070 | Hypothetical protein. | Outer membrane transport energization protein ExbD. | 0.934 |
SFT52738.1 | SFT52786.1 | SAMN04515657_1068 | SAMN04515657_1071 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.948 |
SFT52738.1 | SFT52802.1 | SAMN04515657_1068 | SAMN04515657_1072 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.949 |
SFT52738.1 | SFT52816.1 | SAMN04515657_1068 | SAMN04515657_1073 | Hypothetical protein. | Protein of unknown function. | 0.953 |
SFT52738.1 | SFT59473.1 | SAMN04515657_1068 | SAMN04515657_1282 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.792 |
SFT52738.1 | SFT59506.1 | SAMN04515657_1068 | SAMN04515657_1284 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.761 |
SFT52738.1 | SFT59516.1 | SAMN04515657_1068 | SAMN04515657_1285 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.774 |
SFT52751.1 | SFT47824.1 | SAMN04515657_1069 | SAMN04515657_0746 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB family C-terminal domain-containing protein. | 0.599 |
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