STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT57138.1Ion channel. (140 aa)    
Predicted Functional Partners:
SFT57153.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.808
SFT57113.1
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ.
       0.547
SFT50258.1
Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.542
SFT57124.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
       0.538
SFT57169.1
Hypothetical protein.
       0.527
SFT86995.1
Copper resistance protein B.
  
     0.486
SFT87008.1
Copper-resistance protein, CopA family.
  
     0.457
SFT42007.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
     
 0.404
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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