STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT64096.11-acyl-sn-glycerol-3-phosphate acyltransferase. (303 aa)    
Predicted Functional Partners:
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
 
 
 0.870
SFT64111.1
Miniconductance mechanosensitive channel.
       0.789
SFT38068.1
Hypothetical protein.
    
  0.761
SFT41935.1
Hypothetical protein.
    
  0.761
SFT78524.1
Sel1 repeat-containing protein.
    
  0.761
gpsA
Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.746
SFT50966.1
PAS domain S-box-containing protein.
    
  0.645
SFT70310.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
    
  0.643
SFT64065.1
Protein ImuB.
       0.617
SFT64078.1
Cell division inhibitor SulA.
       0.617
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.