STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT65944.1Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily. (245 aa)    
Predicted Functional Partners:
zapC
Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.726
SFT38943.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.667
SFT40380.1
Hypothetical protein.
  
     0.648
SFT45941.1
Hypothetical protein.
  
     0.611
SFT44667.1
Glutaredoxin-like domain.
  
     0.599
SFT69386.1
Group 4 capsule polysaccharide lipoprotein gfcB, YjbF.
  
     0.543
SFT40458.1
Peptidoglycan-binding protein, CsiV.
  
     0.542
SFT83169.1
Aspartate kinase /homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
     0.534
SFT67858.1
Protein-disulfide isomerase.
  
     0.529
SFT36990.1
YfcL protein.
  
     0.509
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
Server load: low (18%) [HD]