STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT66625.1Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain. (151 aa)    
Predicted Functional Partners:
SFT66457.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 
  0.997
SFT66473.1
FabA-like domain-containing protein.
 
 
  0.993
SFT66641.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  
  0.969
SFT66659.1
3-oxoacyl-[acyl-carrier-protein] synthase II.
 
  
 0.964
SFT66577.1
Dehydrogenase (flavoprotein).
 
     0.960
SFT66565.1
Predicted exporter.
 
   
 0.959
SFT66438.1
Uncharacterized membrane protein.
 
  
 0.957
SFT66609.1
3-oxoacyl-[acyl-carrier-protein] synthase-1.
 
  
 0.956
SFT66531.1
(3S)-malyl-CoA thioesterase.
 
     0.955
SFT66362.1
Beta-ketoacyl synthase, N-terminal domain.
 
  
 0.953
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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