STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT69468.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (204 aa)    
Predicted Functional Partners:
SFT69479.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 0.994
SFT69455.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
 
  
  0.922
SFT69496.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.865
SFT69511.1
UDP-N-acetyl-D-glucosamine dehydrogenase.
    
 0.815
SFT69642.1
Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase.
 
 0.804
lpxB
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 
 0.794
SFT69521.1
Glycosyltransferase involved in cell wall bisynthesis.
     
 0.712
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
 0.671
SFT66457.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.659
SFT69351.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
  
  0.659
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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