STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT69559.1Glycosyltransferase involved in cell wall bisynthesis. (323 aa)    
Predicted Functional Partners:
SFT69577.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.932
SFT69737.1
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.827
SFT69769.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.801
SFT69479.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.798
SFT69751.1
dTDP-4-dehydrorhamnose reductase.
 
  
 0.783
SFT69722.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.769
SFT69606.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.684
SFT69626.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
  
  
 0.667
SFT69587.1
Sulfotransferase domain-containing protein.
       0.655
SFT69496.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.652
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.