STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT73321.1Diguanylate cyclase (GGDEF) domain-containing protein. (698 aa)    
Predicted Functional Partners:
SFT50966.1
PAS domain S-box-containing protein.
 
 
 0.940
SFT88213.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.917
SFT70310.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.913
SFT88222.1
PAS domain S-box-containing protein.
   
 0.910
SFT40104.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.863
SFT74492.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.846
SFT84528.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.845
SFT73620.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
  0.844
SFT73271.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.841
SFT67779.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.836
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
Server load: low (14%) [HD]