STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT73972.1Protein of unknown function. (65 aa)    
Predicted Functional Partners:
SFT73960.1
Iron complex outermembrane recepter protein.
       0.549
SFT51786.1
Uncharacterized membrane protein.
  
     0.449
SFT84428.1
Hypothetical protein.
  
     0.438
SFT38943.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.435
SFT69386.1
Group 4 capsule polysaccharide lipoprotein gfcB, YjbF.
  
     0.417
SFT59718.1
VanZ like family protein.
  
     0.412
SFT71832.1
Adenosine deaminase.
  
     0.401
Your Current Organism:
Idiomarina abyssalis
NCBI taxonomy Id: 86102
Other names: ATCC BAA-312, I. abyssalis, Idiomarina abyssalis Ivanova et al. 2000, KMM 227, marine bacterium KM227
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.